ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6pbpA2 - ECOD Domain | ECOD

ECOD/Domains/e6pbpA2

e6pbpA2

UID: 002548939

PDB

Range: A:7-202
PDB: 6PBP chain A(all domains)
UniProt: Q9HUX5 (all domains)
Gene: cntM

Molecule: Pseudopaline Dehydrogenase

3D Structure

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Related Domains

Browse other domains in Staph_opine_DH →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyStaph_opine_DH(2003.1.1.64)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
N-[(1S)-1-carboxy-3-{[(1S)-1-carboxy-2-(1H-imidazol-5-yl)ethyl]amino}propyl]-L-glutamic acidO7J

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

PF10100Staph_opine_DH

Staphylopine dehydrogenase

External Links

ECOD PDB View: 6PBP RCSB PDB: 6PBP PDBe: 6PBP UniProt: Q9HUX5

Downloads

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1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.