ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6pbfC2 - ECOD Domain | ECOD

ECOD/Domains/e6pbfC2

e6pbfC2

UID: 002549150

PDB

Range: C:311-355,C:376-614
PDB: 6PBF chain C(all domains)
UniProt: Q9XSM3 (all domains)
Gene: Trpv5

Molecule: Transient receptor potential cation channel subfamily V member 5

3D Structure

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Related Domains

Browse other domains in Ion_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans(5054.1.1.2)

Ligands

in contact, ≤ 4 Å

(1S)-1-(4-oxo-5-phenyl-3,4-dihydrothieno[2,3-d]pyrimidin-2-yl)ethyl [(2S)-3-oxo-3,4-dihydro-2H-1,4-benzothiazin-2-yl]acetateO6V

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

External Links

ECOD PDB View: 6PBF RCSB PDB: 6PBF PDBe: 6PBF UniProt: Q9XSM3

Downloads

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