ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6myoC1 - ECOD Domain | ECOD

ECOD/Domains/e6myoC1

e6myoC1

UID: 002549539

PDB

Range: C:2-140
PDB: 6MYO chain C(all domains)
UniProt: A0A3Q2U2Y6 (all domains)

Molecule: Succinate dehydrogenase cytochrome b, large subunit

3D Structure

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Related Domains

Browse other domains in Sdh_cyt →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupFumarate reductase respiratory complex transmembrane subunits(5069.1.3)

FFamilySdh_cyt(5069.1.3.1)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
Undecyl-Beta-D-MaltopyranosideUMQ
drugDrugBank DB02686

Pfam Families

PF01127Sdh_cyt

Succinate dehydrogenase/Fumarate reductase transmembrane subunit

ClanCL0335FumRed-TM

External Links

ECOD PDB View: 6MYO RCSB PDB: 6MYO PDBe: 6MYO UniProt: A0A3Q2U2Y6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-Distearoyl-sn-glycerophosphoethanolamine

N-[3-(1-methylethoxy)phenyl]-2-(trifluoromethyl)benzamideFTN

Unknown ligandUNL

Shown in the structure viewer. Drug annotations from DrugDomain.