ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mypA3 - ECOD Domain | ECOD

ECOD/Domains/e6mypA3

e6mypA3

UID: 002550550

PDB

Range: A:247-375
PDB: 6MYP chain A(all domains)
UniProt: Q9YHT1 (all domains)
Gene: SDHA

Molecule: Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

3D Structure

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Related Domains

Browse other domains in FAD_binding_2 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupSuccinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain(278)

HH-groupSuccinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain(278.1)

TT-groupSuccinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain(278.1.1)

FFamilyFAD_binding_2(278.1.1.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Oxaloacetate IonOAA
drugDrugBank DB02637

Pfam Families

PF00890FAD_binding_2

FAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6MYP RCSB PDB: 6MYP PDBe: 6MYP UniProt: Q9YHT1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Potassium ion

K

metal

Unknown ligandUNL

+ 1 additive (Bicarbonate ion)

Bicarbonate ionBCT

Shown in the structure viewer. Drug annotations from DrugDomain.