ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6myuD1 - ECOD Domain | ECOD

ECOD/Domains/e6myuD1

e6myuD1

UID: 002550582

PDB

Range: D:2-103
PDB: 6MYU chain D(all domains)
UniProt: Q5ZIS0 (all domains)
Gene: SDHD

Molecule: Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial

3D Structure

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Related Domains

Browse other domains in CybS →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupFumarate reductase respiratory complex transmembrane subunits(5069.1.3)

FFamilyCybS(5069.1.3.4)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
1,2-Distearoyl-sn-glycerophosphoethanolamine3PE
Unknown ligandUNL

Pfam Families

CybS, succinate dehydrogenase cytochrome B small subunit

ClanCL0335FumRed-TM

External Links

ECOD PDB View: 6MYU RCSB PDB: 6MYU PDBe: 6MYU UniProt: Q5ZIS0

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.