ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6qptA2 - ECOD Domain | ECOD

ECOD/Domains/e6qptA2

e6qptA2

UID: 002550768

PDB

Range: A:164-325
PDB: 6QPT chain A(all domains)
UniProt: I6NAW4 (all domains)
Gene: nirK

Molecule: Copper-containing nitrite reductase

3D Structure

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Related Domains

Browse other domains in Cu-oxidase →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupCupredoxin-like(3156)

HH-groupCupredoxin-related(3156.1)

TT-groupCupredoxin-related(3156.1.1)

FFamilyCu-oxidase(3156.1.1.4)

Ligands

in contact, ≤ 4 Å

NitriteNO2
drugDrugBank DB12529
COPPER (II) IONCU
metal

+ 1 additive (Tetraethylene glycol)

Pfam Families

PF00394Cu-oxidase

Multicopper oxidase

ClanCL0026CU_oxidase

External Links

ECOD PDB View: 6QPT RCSB PDB: 6QPT PDBe: 6QPT UniProt: I6NAW4

Downloads

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Tetraethylene glycol

Shown in the structure viewer. Drug annotations from DrugDomain.