ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gk0A1 - ECOD Domain | ECOD

ECOD/Domains/e6gk0A1

e6gk0A1

UID: 002553378

PDB

Range: A:33-395
PDB: 6GK0 chain A(all domains)
UniProt: Q02127 (all domains)
Gene: DHODH

Molecule: Dihydroorotate dehydrogenase (quinone), mitochondrial

3D Structure

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Related Domains

Browse other domains in DHO_dh →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDHO_dh(2002.1.1.54)

Ligands

in contact, ≤ 4 Å

Dihydroorotic AcidDOR
drugDrugBank DB02129
Flavin mononucleotideFMN
drugDrugBank DB03247

Pfam Families

Dihydroorotate dehydrogenase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6GK0 RCSB PDB: 6GK0 PDBe: 6GK0 UniProt: Q02127

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Chloride ion

4-~{tert}-butyl-~{N}-[[4-[5-(dimethylamino)pentanoylamino]phenyl]carbamothioyl]benzamideF1W

+ 4 additives (Acetic acid, Capric dimethyl amine oxide, Glycerin, …)

Acetic acidACY
DrugBank DB03166
Capric dimethyl amine oxideDDQ
DrugBank DB02613
GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.