ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mg0A2 - ECOD Domain | ECOD

ECOD/Domains/e6mg0A2

e6mg0A2

UID: 002554282

PDB

Range: A:340-509
PDB: 6MG0 chain A(all domains)
UniProt: Q70LM7 (all domains)
Gene: lgrA

Molecule: Linear gramicidin synthase subunit A

3D Structure

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Related Domains

Browse other domains in AMP-binding →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCoA-dependent acyltransferases(323)

HH-groupCoA-dependent acyltransferases(323.1)

TT-groupCoA-dependent acyltransferases(323.1.1)

FFamilyAMP-binding(323.1.1.3)

Ligands

in contact, ≤ 4 Å

5'-({[(2R,3R)-3-amino-2-{[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-{[oxido(oxo)phosphonio]oxy}butanoyl]-beta-alanyl}amino)ethyl]sulfanyl}-4-methylpentyl]sulfonyl}amino)-5'-deoxyadenosineDG9

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00501AMP-binding

AMP-binding enzyme

ClanCL0378ANL

External Links

ECOD PDB View: 6MG0 RCSB PDB: 6MG0 PDBe: 6MG0 UniProt: Q70LM7

Downloads

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