ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6pc1B2 - ECOD Domain | ECOD

ECOD/Domains/e6pc1B2

e6pc1B2

UID: 002554800

PDB

Range: B:119-303
PDB: 6PC1 chain B(all domains)
UniProt: B5ZA44 (all domains)
Gene: HPG27_257

Molecule: Guanosine pentaphosphate phosphohydrolase

3D Structure

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Related Domains

Browse other domains in Ppx-GppA →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyPpx-GppA(2484.1.1.29)

Ligands

in contact, ≤ 4 Å

Guanosine tetraphosphateG4P
drugDrugBank DB04022
(2S)-2-hydroxybutanedioic acidLMR
Magnesium ionMG

Pfam Families

PF02541Ppx-GppA

Ppx/GppA phosphatase family

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 6PC1 RCSB PDB: 6PC1 PDBe: 6PC1 UniProt: B5ZA44

Downloads

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metalwithin 5 Å only

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.