ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6pgkL1 - ECOD Domain | ECOD

ECOD/Domains/e6pgkL1

e6pgkL1

UID: 002554958

PDB

Range: L:4-154
PDB: 6PGK chain L(all domains)
UniProt: Q8DGB4 (all domains)
Gene: psaL

Molecule: Photosystem I reaction center subunit XI

3D Structure

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Related Domains

Browse other domains in PsaL →

Classification

AArchitecturealpha bundles(a.7)

XX-groupPhotosystem I reaction center subunit XI, PsaL(5064)

HH-groupPhotosystem I reaction center subunit XI, PsaL(5064.1)

TT-groupPhotosystem I reaction center subunit XI, PsaL(5064.1.1)

FFamilyPsaL(5064.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
Calcium ion

Pfam Families

Photosystem I reaction centre subunit XI

External Links

ECOD PDB View: 6PGK RCSB PDB: 6PGK PDBe: 6PGK UniProt: Q8DGB4

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.