ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6q9nA1 - ECOD Domain | ECOD

ECOD/Domains/e6q9nA1

e6q9nA1

UID: 002555403

PDB

Range: A:139-167,A:239-326
PDB: 6Q9N chain A(all domains)
UniProt: A0A0H3JPA5 (all domains)
Gene: mecA

Molecule: Penicillin binding protein 2 prime

3D Structure

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Related Domains

Browse other domains in PBP_dimer →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupPenicillin binding protein dimerisation domain(3702)

HH-groupPenicillin binding protein dimerisation domain(3702.1)

TT-groupPenicillin binding protein dimerisation domain(3702.1.1)

FFamilyPBP_dimer(3702.1.1.1)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal
Chloride ionCL
beta-muramic acidMUR

Pfam Families

PF03717PBP_dimer

Penicillin-binding Protein dimerisation domain

ClanCL0776PBP_NTD

External Links

ECOD PDB View: 6Q9N RCSB PDB: 6Q9N PDBe: 6Q9N UniProt: A0A0H3JPA5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

3-[2-[(~{E})-2-(4-ethynylphenyl)ethenyl]-4-oxidanylidene-quinazolin-3-yl]benzoic acidQLN

Shown in the structure viewer. Drug annotations from DrugDomain.