ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rx4A1 - ECOD Domain | ECOD

ECOD/Domains/e6rx4A1

e6rx4A1

UID: 002555592

PDB

Range: A:178-262,A:313-515
PDB: 6RX4 chain A(all domains)
UniProt: P0ABJ9 (all domains)
Gene: cydA

Molecule: Cytochrome bd-I ubiquinol oxidase subunit 1

3D Structure

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Related Domains

Browse other domains in Cyt_bd_oxida_I →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupTransmembrane di-heme cytochromes(5069.1.1)

FFamilyCyt_bd_oxida_I(5069.1.1.3)

Ligands

in contact, ≤ 4 Å

Hybrid Between B and C Type Hemes (Protoporphyrin Ixcontaining Fe)HEB
drugDrugBank DB02182
Cis-heme d hydroxychlorin gamma-spirolactoneHDD
within 5 Å only

Shown in the structure viewer.

Pfam Families

PF01654Cyt_bd_oxida_I

Cytochrome bd terminal oxidase subunit I

External Links

ECOD PDB View: 6RX4 RCSB PDB: 6RX4 PDBe: 6RX4 UniProt: P0ABJ9

Downloads

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Drug annotations from DrugDomain.