ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6s6yI1 - ECOD Domain | ECOD

ECOD/Domains/e6s6yI1

e6s6yI1

UID: 002555611

PDB

Range: I:52-447
PDB: 6S6Y chain I(all domains)
UniProt: A9W3R9 (all domains)

Molecule: Formylmethanofuran dehydrogenase subunit A

3D Structure

Loading viewer...

Related Domains

Browse other domains in Amidohydro_3 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAmidohydro_3(2002.1.1.152)

Ligands

in contact, ≤ 4 Å

D-Glutamic AcidDGL
drugDrugBank DB02517
Glutamic acidGLU
drugDrugBank DB00142
Chloride ion

Pfam Families

PF07969Amidohydro_3

Amidohydrolase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6S6Y RCSB PDB: 6S6Y PDBe: 6S6Y UniProt: A9W3R9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Potassium ionK

metal

(2~{S})-3-[4-[[5-(aminomethyl)furan-3-yl]methoxy]phenyl]-2-(methylamino)propanoic acidL6K

Zinc ionZN

metal

+ 2 additives (Formic acid, 1,2-ETHANEDIOL)

Formic acidFMT
DrugBank DB01942
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.