ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6sc8A2 - ECOD Domain | ECOD

ECOD/Domains/e6sc8A2

e6sc8A2

UID: 002555679

PDB

Range: A:853-935
PDB: 6SC8 chain A(all domains)
UniProt: Q96EP0 (all domains)
Gene: RNF31

Molecule: E3 ubiquitin-protein ligase RNF31

3D Structure

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Related Domains

Browse other domains in IBR_1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupIBR domain(376.1.6)

FFamilyIBR_1(376.1.6.2)

Ligands

in contact, ≤ 4 Å

[2-(methylamino)-2-oxidanylidene-ethyl] (~{E})-4-[(2-oxidanylidene-5,6,7,8-tetrahydro-1~{H}-quinolin-3-yl)carbonylamino]but-2-enoateL6E
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

IBR domain

ClanCL0229RING

External Links

ECOD PDB View: 6SC8 RCSB PDB: 6SC8 PDBe: 6SC8 UniProt: Q96EP0

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.