ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6tcxAAA1 - ECOD Domain | ECOD

ECOD/Domains/e6tcxAAA1

e6tcxAAA1

UID: 002556038

PDB

Range: AAA:1-212
PDB: 6TCX chain AAA(all domains)
UniProt: P00784 (all domains)

Molecule: Papain

3D Structure

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Related Domains

Browse other domains in Peptidase_C1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C1(219.1.1.1)

Ligands

in contact, ≤ 4 Å

(2~{R})-2-[[(1~{S})-1-[(6~{S})-2-azanyl-1,4,5,6-tetrahydropyrimidin-6-yl]-2-[[(2~{S})-3-methyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanyl-3-phenyl-propan-2-yl]amino]butan-2-yl]amino]-2-oxidanylidene-ethyl]carbamoylamino]-3-(4-hydroxyphenyl)propanoic acidN1W

+ 1 additive (HEPES)

HEPESEPE

Pfam Families

PF00112Peptidase_C1

Papain family cysteine protease

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 6TCX RCSB PDB: 6TCX PDBe: 6TCX UniProt: P00784

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.