ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rfr11 - ECOD Domain | ECOD

ECOD/Domains/e6rfr11

e6rfr11

UID: 002559100

PDB

Range: 1:1-264,1:284-340
PDB: 6RFR chain 1(all domains)
UniProt: S5U3V2 (all domains)
Gene: nad1

Molecule: Subunit NU1M of NADH:Ubiquinone Oxidoreductase (Complex I)

3D Structure

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Related Domains

Browse other domains in NADHdh →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium/proton antiporter subunits-like(3281)

HH-groupSodium/proton antiporter subunits-like(3281.1)

TT-groupNADH-quinone oxidoreductase subunit 8 (Nqo8)-related(3281.1.2)

FFamilyNADHdh(3281.1.2.1)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
Diundecyl Phosphatidyl CholinePLC
drugDrugBank DB02777

Pfam Families

NADH dehydrogenase

ClanCL0425ComplexI-N

External Links

ECOD PDB View: 6RFR RCSB PDB: 6RFR PDBe: 6RFR UniProt: S5U3V2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-Distearoyl-sn-glycerophosphoethanolamine

PhosphatidylinositolT7X

Ubiquinone-9UQ9

Shown in the structure viewer. Drug annotations from DrugDomain.