ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6m8pA2 - ECOD Domain | ECOD

ECOD/Domains/e6m8pA2

e6m8pA2

UID: 002561441

PDB

Range: A:46-253
PDB: 6M8P chain A(all domains)
UniProt: Q9NZ08 (all domains)
Gene: ERAP1

Molecule: Endoplasmic reticulum aminopeptidase 1

3D Structure

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Related Domains

Browse other domains in Peptidase_M1_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupBaculovirus p35 protein-related(4081)

HH-groupBaculovirus p35 protein-related(4081.1)

TT-groupBaculovirus p35 protein-related(4081.1.1)

FFamilyPeptidase_M1_N(4081.1.1.5)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
Nalpha-[(2S)-2-{[[(1R)-1-amino-3-phenylpropyl](hydroxy)phosphoryl]methyl}-4-methylpentanoyl]-L-tryptophanamideP52

+ 1 additive (Sulfate ion)

Pfam Families

PF17900Peptidase_M1_N

Peptidase M1 N-terminal domain

ClanCL0672p35

External Links

ECOD PDB View: 6M8P RCSB PDB: 6M8P PDBe: 6M8P UniProt: Q9NZ08

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.