ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6nf1A3 - ECOD Domain | ECOD

ECOD/Domains/e6nf1A3

e6nf1A3

UID: 002561628

PDB

Range: A:509-565
PDB: 6NF1 chain A(all domains)
UniProt: P15498 (all domains)
Gene: VAV1

Molecule: Proto-oncogene vav

3D Structure

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Related Domains

Browse other domains in C1_1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupCysteine-rich domain(376.1.2)

FFamilyC1_1(376.1.2.1)

Ligands

in contact, ≤ 4 Å

(2S)-3-[(3S)-1-(ethylsulfonyl)piperidin-3-yl]-2-{[3-(4-methylphenyl)imidazo[1,2-a]pyrazin-8-yl]amino}propan-1-ol9JY
Zinc ionZN
metal

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

2-(N-morpholino)ethanesulfonic acid

Pfam Families

Phorbol esters/diacylglycerol binding domain (C1 domain)

ClanCL0229RING

External Links

ECOD PDB View: 6NF1 RCSB PDB: 6NF1 PDBe: 6NF1 UniProt: P15498

Downloads

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DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.