ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6p59B1 - ECOD Domain | ECOD

ECOD/Domains/e6p59B1

e6p59B1

UID: 002561747

PDB

Range: B:3-177
PDB: 6P59 chain B(all domains)
UniProt: E1ANT9 (all domains)
Gene: vif

Molecule: Virion infectivity factor

3D Structure

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Related Domains

Browse other domains in Vif →

Classification

AArchitecturea+b two layers(a.11)

XX-groupVirion infectivity factor Vif(3800)

HH-groupVirion infectivity factor Vif(3800.1)

TT-groupVirion infectivity factor Vif(3800.1.1)

FFamilyVif(3800.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (Glycerin, 2-(N-morpholino)ethanesulfonic acid)

GlycerinGOL
DrugBank DB09462
2-(N-morpholino)ethanesulfonic acid

Pfam Families

Retroviral Vif (Viral infectivity) protein

External Links

ECOD PDB View: 6P59 RCSB PDB: 6P59 PDBe: 6P59 UniProt: E1ANT9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.