ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6p8oA1 - ECOD Domain | ECOD

ECOD/Domains/e6p8oA1

e6p8oA1

UID: 002561778

RepresentativePDB

Range: A:2-131
PDB: 6P8O chain A(all domains)
UniProt: Q8GQ50 (all domains)
Gene: ORF

Molecule: HORMA domain containing protein

3D Structure

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Related Domains

Browse other domains in bacHORMA_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupThe spindle assembly checkpoint protein mad2(859)

HH-groupThe spindle assembly checkpoint protein mad2(859.1)

TT-groupThe spindle assembly checkpoint protein mad2(859.1.1)

FFamilybacHORMA_2(859.1.1.5)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
NICKEL (II) IONNI
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18173bacHORMA_2

Bacterial HORMA domain 2

ClanCL0651Mad2

External Links

ECOD PDB View: 6P8O RCSB PDB: 6P8O PDBe: 6P8O UniProt: Q8GQ50

Downloads

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