ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rhwH1 - ECOD Domain | ECOD

ECOD/Domains/e6rhwH1

e6rhwH1

UID: 002562466

PDB

Range: H:45-324
PDB: 6RHW chain H(all domains)
UniProt: A0A0D6HC73 (all domains)
Gene: lukH

Molecule: Beta-channel forming cytolysin

3D Structure

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Related Domains

Browse other domains in Leukocidin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupLeukocidin-like(11.13)

TT-groupLeukocidin-like(11.13.1)

FFamilyLeukocidin(11.13.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07968Leukocidin

Leukocidin/Hemolysin toxin family

ClanCL0636Leukocidin

External Links

ECOD PDB View: 6RHW RCSB PDB: 6RHW PDBe: 6RHW UniProt: A0A0D6HC73

Downloads

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