ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rtuB1 - ECOD Domain | ECOD

ECOD/Domains/e6rtuB1

e6rtuB1

UID: 002562520

PDB

Range: B:268-512
PDB: 6RTU chain B(all domains)
UniProt: O85725 (all domains)
Gene: pcd

Molecule: Semialdehyde dehydrogenase Pcd

3D Structure

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Related Domains

Browse other domains in Aldedh →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupALDH-like(7524)

HH-groupALDH-like(7524.1)

TT-groupALDH-like(7524.1.1)

FFamilyAldedh(7524.1.1.1)

Ligands

in contact, ≤ 4 Å

2-AMINOHEXANEDIOIC ACIDUN1
within 5 Å only

+ 3 additives (Acetate, Glycerin, Sulfate ion)

AcetateACT
DrugBank DB14511
Glycerin

Pfam Families

Aldehyde dehydrogenase family

ClanCL0099ALDH-like

External Links

ECOD PDB View: 6RTU RCSB PDB: 6RTU PDBe: 6RTU UniProt: O85725

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.