ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rtuB2 - ECOD Domain | ECOD

ECOD/Domains/e6rtuB2

e6rtuB2

UID: 002562521

PDB

Range: B:5-267
PDB: 6RTU chain B(all domains)
UniProt: O85725 (all domains)
Gene: pcd

Molecule: Semialdehyde dehydrogenase Pcd

3D Structure

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Related Domains

Browse other domains in Aldedh →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupALDH-like(7524)

HH-groupALDH-like(7524.1)

TT-groupALDH-like(7524.1.1)

FFamilyAldedh(7524.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Aldehyde dehydrogenase family

ClanCL0099ALDH-like

External Links

ECOD PDB View: 6RTU RCSB PDB: 6RTU PDBe: 6RTU UniProt: O85725

Downloads

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