ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6s24A1 - ECOD Domain | ECOD

ECOD/Domains/e6s24A1

e6s24A1

UID: 002562566

PDB

Range: A:499-630
PDB: 6S24 chain A(all domains)
UniProt: H0ZAB5 (all domains)
Gene: GALNT3

Molecule: Polypeptide N-acetylgalactosaminyltransferase

3D Structure

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Related Domains

Browse other domains in Ricin_B_lectin →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-Trefoil(6)

HH-groupbeta-Trefoil(6.1)

TT-groupbeta-Trefoil(6.1.1)

FFamilyRicin_B_lectin(6.1.1.4)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-beta-D-galactopyranoseNGA

+ 1 additive (Phosphate ion)

Phosphate ionPO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00652Ricin_B_lectin

Ricin-type beta-trefoil lectin domain

ClanCL0066Trefoil

External Links

ECOD PDB View: 6S24 RCSB PDB: 6S24 PDBe: 6S24 UniProt: H0ZAB5

Downloads

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