ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2dt5A1 - ECOD Domain | ECOD

ECOD/Domains/e2dt5A1

e2dt5A1

UID: 000002563

RepresentativePDB

Range: A:4-77
PDB: 2DT5 chain A(all domains)
UniProt: Q5SHS3 (all domains)
Gene: rex

Molecule: AT-rich DNA-binding protein

3D Structure

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Related Domains

Browse other domains in Put_DNA-bind_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyPut_DNA-bind_N(101.1.2.81)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
within 5 Å only

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ion

Pfam Families

PF06971Put_DNA-bind_N

Putative DNA-binding protein N-terminus

ClanCL0123HTH

External Links

ECOD PDB View: 2DT5 RCSB PDB: 2DT5 PDBe: 2DT5 UniProt: Q5SHS3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.