ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ud7B3 - ECOD Domain | ECOD

ECOD/Domains/e6ud7B3

e6ud7B3

UID: 002563676

PDB

Range: B:356-1044
PDB: 6UD7 chain B(all domains)
UniProt: Q16531 (all domains)
Gene: DDB1

Molecule: DNA damage-binding protein 1,DNA damage-binding protein 1

3D Structure

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Related Domains

Browse other domains in CPSF_A →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyCPSF_A(5.1.4.16)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

CPSF A subunit region

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 6UD7 RCSB PDB: 6UD7 PDBe: 6UD7 UniProt: Q16531

Downloads

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