ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6uz3A1 - ECOD Domain | ECOD

ECOD/Domains/e6uz3A1

e6uz3A1

UID: 002563978

PDB

Range: A:121-424
PDB: 6UZ3 chain A(all domains)
UniProt: P15389 (all domains)
Gene: Scn5a

Molecule: Sodium channel protein type 5 subunit alpha,Green fluorescent protein

3D Structure

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Related Domains

Browse other domains in Ion_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans(5054.1.1.2)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate6OU
(3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en9Z9

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

External Links

ECOD PDB View: 6UZ3 RCSB PDB: 6UZ3 PDBe: 6UZ3 UniProt: P15389

Downloads

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