ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5q1pA1 - ECOD Domain | ECOD

ECOD/Domains/e5q1pA1

e5q1pA1

UID: 002567760

PDB

Range: A:700-1017
PDB: 5Q1P chain A(all domains)
UniProt: Q6PJP8 (all domains)
Gene: DCLRE1A

Molecule: DNA cross-link repair 1A protein

3D Structure

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Related Domains

Browse other domains in DRMBL,Lactamase_B_2 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyDRMBL,Lactamase_B_2(247.1.1.10)

Ligands

in contact, ≤ 4 Å

1-cyclohexyl-3-(2-pyridin-4-ylethyl)ureaAWP
NICKEL (II) IONNI
metal

+ 1 additive (Malonate Ion)

Malonate IonMLI

Pfam Families

DNA repair metallo-beta-lactamase

ClanCL0398RMMBL_DRMBL

PF12706Lactamase_B_2

Beta-lactamase superfamily domain

ClanCL0381Metallo-HOrase

External Links

ECOD PDB View: 5Q1P RCSB PDB: 5Q1P PDBe: 5Q1P UniProt: Q6PJP8

Downloads

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DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.