ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rtmA2 - ECOD Domain | ECOD

ECOD/Domains/e6rtmA2

e6rtmA2

UID: 002568343

PDB

Range: A:102-266,A:353-369,A:398-464
PDB: 6RTM chain A(all domains)
UniProt: G4V8J4 (all domains)

Molecule: Thioredoxin glutathione reductase

3D Structure

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Related Domains

Browse other domains in FAD_binding_2,Pyr_redox_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyFAD_binding_2,Pyr_redox_2(2003.1.2.8)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (Triethylene glycol)

Triethylene glycolPGE
DrugBank DB02327

Shown in the structure viewer.

Pfam Families

PF00890FAD_binding_2

FAD binding domain

ClanCL0063NADP_Rossmann

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6RTM RCSB PDB: 6RTM PDBe: 6RTM UniProt: G4V8J4

Downloads

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Drug annotations from DrugDomain.