ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6smgD1 - ECOD Domain | ECOD

ECOD/Domains/e6smgD1

e6smgD1

UID: 002568917

PDB

Range: D:28-68
PDB: 6SMG chain D(all domains)
UniProt: Q6JKR9 (all domains)

Molecule: Capsid protein VP4

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pico_P1A →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyPico_P1A(10.2.1.23)

Pfam Families

PF02226Pico_P1A

Picornavirus coat protein (VP4)

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 6SMG RCSB PDB: 6SMG PDBe: 6SMG UniProt: Q6JKR9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure