ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6e2uA2 - ECOD Domain | ECOD

ECOD/Domains/e6e2uA2

e6e2uA2

UID: 002569998

PDB

Range: A:168-326
PDB: 6E2U chain A(all domains)
UniProt: Q9FD68 (all domains)
Gene: mvaD

Molecule: Mevalonate diphosphate decarboxylase

3D Structure

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Related Domains

Browse other domains in MDD_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupGHMP Kinase, C-terminal domain(304.1)

TT-groupGHMP Kinase, C-terminal domain(304.1.1)

FFamilyMDD_C(304.1.1.3)

Ligands

in contact, ≤ 4 Å

Adenosine-5'-[Beta, Gamma-Methylene]TriphosphateACP
drugDrugBank DB03909
(3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACIDDP6
Magnesium ion

Pfam Families

Mevalonate 5-diphosphate decarboxylase C-terminal domain

ClanCL0677GHMP_C

External Links

ECOD PDB View: 6E2U RCSB PDB: 6E2U PDBe: 6E2U UniProt: Q9FD68

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.