ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6nmnB1 - ECOD Domain | ECOD

ECOD/Domains/e6nmnB1

e6nmnB1

UID: 002570305

PDB

Range: B:126-253
PDB: 6NMN chain B(all domains)
UniProt: Q57514 (all domains)

Molecule: Kanamycin nucleotidyltransferase

3D Structure

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Related Domains

Browse other domains in KNTase_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupHEPN(601.7)

TT-groupNucleotidyltransferase substrate binding subunit/domain(601.7.1)

FFamilyKNTase_C(601.7.1.5)

Ligands

in contact, ≤ 4 Å

FramycetinNMY
drugDrugBank DB00452
Adenosine phosphateAMP
drugDrugBank DB00131within 5 Å only

Pfam Families

PF07827KNTase_C

KNTase C-terminal domain

ClanCL0291KNTase_C

External Links

ECOD PDB View: 6NMN RCSB PDB: 6NMN PDBe: 6NMN UniProt: Q57514

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.