ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6sj3B1 - ECOD Domain | ECOD

ECOD/Domains/e6sj3B1

e6sj3B1

UID: 002570602

PDB

Range: B:70-77,B:97-398,B:454-494
PDB: 6SJ3 chain B(all domains)
UniProt: A0A022MQ12 (all domains)
Gene: natAM

Molecule: Amidohydrolase

3D Structure

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Related Domains

Browse other domains in Amidohydro_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAmidohydro_1(2002.1.1.83)

Ligands

in contact, ≤ 4 Å

3-HYDROXYBENZOIC ACID3HB
Zinc ionZN
metal

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL

Pfam Families

PF01979Amidohydro_1

Amidohydrolase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6SJ3 RCSB PDB: 6SJ3 PDBe: 6SJ3 UniProt: A0A022MQ12

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.