ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6kp0A1 - ECOD Domain | ECOD

ECOD/Domains/e6kp0A1

e6kp0A1

UID: 002572620

PDB

Range: A:234-468
PDB: 6KP0 chain A(all domains)
UniProt: Q9RVZ5 (all domains)
Gene: DR_0875

Molecule: Zinc metalloprotease, putative

3D Structure

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Related Domains

Browse other domains in Peptidase_M1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M1(2498.1.1.9)

Ligands

in contact, ≤ 4 Å

ArginineARG
drugDrugBank DB00125
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01433Peptidase_M1

Peptidase family M1 domain

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 6KP0 RCSB PDB: 6KP0 PDBe: 6KP0 UniProt: Q9RVZ5

Downloads

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