ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ii3A3 - ECOD Domain | ECOD

ECOD/Domains/e4ii3A3

e4ii3A3

UID: 002573289

PDB

Range: A:14-173,A:260-398
PDB: 4II3 chain A(all domains)
UniProt: O94609 (all domains)
Gene: ptr3

Molecule: Ubiquitin-activating enzyme E1 1

3D Structure

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Related Domains

Browse other domains in ThiF, E1_4HB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupActivating enzymes of the ubiquitin-like proteins(2003.1.9)

FFamilyThiF, E1_4HB(2003.1.9.8)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

ThiF family

ClanCL0063NADP_Rossmann

Ubiquitin-activating enzyme E1 four-helix bundle

External Links

ECOD PDB View: 4II3 RCSB PDB: 4II3 PDBe: 4II3 UniProt: O94609

Downloads

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