ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nqdC2 - ECOD Domain | ECOD

ECOD/Domains/e5nqdC2

e5nqdC2

UID: 002574977

PDB

Range: C:2-122
PDB: 5NQD chain C(all domains)
UniProt: Q6VAL8 (all domains)
Gene: aroA

Molecule: AroA

3D Structure

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Related Domains

Browse other domains in Rieske_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFormate dehydrogenase/DMSO reductase, domain 1(1001)

HH-groupFormate dehydrogenase/DMSO reductase, domain 1(1001.1)

TT-groupFormate dehydrogenase/DMSO reductase, domain 1(1001.1.1)

FFamilyRieske_3(1001.1.1.5)

Ligands

in contact, ≤ 4 Å

FE3-S4 CLUSTERF3S
2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDEMGD

+ 2 additives (Heptaethylene glycol, Glycerol)

Heptaethylene glycolP33

Pfam Families

PF18465Rieske_3

Rieske 3Fe-4S

ClanCL0516ISP-domain

External Links

ECOD PDB View: 5NQD RCSB PDB: 5NQD PDBe: 5NQD UniProt: Q6VAL8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03394

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.