ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ot7D1 - ECOD Domain | ECOD

ECOD/Domains/e6ot7D1

e6ot7D1

UID: 002575343

PDB

Range: D:1-106
PDB: 6OT7 chain D(all domains)
UniProt: P0ABE7 (all domains)
Gene: cybC

Molecule: Soluble cytochrome b562

3D Structure

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Related Domains

Browse other domains in Cytochrom_B562 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupCytochromes(601.2)

TT-groupCytochromes(601.2.1)

FFamilyCytochrom_B562(601.2.1.6)

Ligands

in contact, ≤ 4 Å

Acetohydroxamic acidHAE
drugDrugBank DB00551
Ferroheme CHEC
drugDrugBank DB03317
Zinc ion

Pfam Families

PF07361Cytochrom_B562

Cytochrome b562

External Links

ECOD PDB View: 6OT7 RCSB PDB: 6OT7 PDBe: 6OT7 UniProt: P0ABE7

Downloads

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metal

FE (III) IONFE

metalwithin 5 Å only

+ 1 additive (Pentaethylene glycol)

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.