ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6lhqC1 - ECOD Domain | ECOD

ECOD/Domains/e6lhqC1

e6lhqC1

UID: 002575581

PDB

Range: C:1-242
PDB: 6LHQ chain C(all domains)
UniProt: A0A2R4NBT3 (all domains)

Molecule: VP3 protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rhv →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyRhv(10.2.1.1)

Ligands

in contact, ≤ 4 Å

SphingosineSPH
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

picornavirus capsid protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 6LHQ RCSB PDB: 6LHQ PDBe: 6LHQ UniProt: A0A2R4NBT3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure