ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6v3aC2 - ECOD Domain | ECOD

ECOD/Domains/e6v3aC2

e6v3aC2

UID: 002575846

PDB

Range: C:4-125
PDB: 6V3A chain C(all domains)
UniProt: B7IA36 (all domains)
Gene: rplB

Molecule: 50S ribosomal protein L2

3D Structure

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Related Domains

Browse other domains in Ribosomal_L2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRibosomal_L2(2.1.1.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00181Ribosomal_L2_N

Ribosomal Proteins L2, RNA binding N-terminal domain

ClanCL0021OB

External Links

ECOD PDB View: 6V3A RCSB PDB: 6V3A PDBe: 6V3A UniProt: B7IA36

Downloads

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