ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6pwdA1 - ECOD Domain | ECOD

ECOD/Domains/e6pwdA1

e6pwdA1

UID: 002576231

RepresentativePDB

Range: A:25-200
PDB: 6PWD chain A(all domains)
UniProt: A0A085GHR3 (all domains)
Gene: hopBF1

Molecule: Type III effector HopBF1

3D Structure

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Related Domains

Browse other domains in HopBF1_kinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyHopBF1_kinase(206.1.1.67)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF26324HopBF1_kinase

Type III secretion system effector HopBF1 kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 6PWD RCSB PDB: 6PWD PDBe: 6PWD UniProt: A0A085GHR3

Downloads

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