ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jciA1 - ECOD Domain | ECOD

ECOD/Domains/e6jciA1

e6jciA1

UID: 002576247

PDB

Range: A:3-429
PDB: 6JCI chain A(all domains)
UniProt: A0A1X9T5X9 (all domains)
Gene: PREP

Molecule: Prolyl endopeptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_S9_N →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyPeptidase_S9_N(5.1.4.14)

Ligands

in contact, ≤ 4 Å

1-[4-oxidanyl-2-(1,3-thiazolidin-3-ylcarbonyl)pyrrolidin-1-yl]-4-[2-[(~{E})-2-phenylethenyl]phenoxy]butan-1-oneBKO

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02897Peptidase_S9_N

Prolyl oligopeptidase, N-terminal beta-propeller domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 6JCI RCSB PDB: 6JCI PDBe: 6JCI UniProt: A0A1X9T5X9

Downloads

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