ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xwyA1 - ECOD Domain | ECOD

ECOD/Domains/e6xwyA1

e6xwyA1

UID: 002576493

PDB

Range: A:2-221
PDB: 6XWY chain A(all domains)
UniProt: Q8ISF8 (all domains)

Molecule: Red fluorescent protein eqFP611

3D Structure

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Related Domains

Browse other domains in GFP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupGFP-like(271)

HH-groupGFP-like(271.1)

TT-groupGFP-like(271.1.1)

FFamilyGFP(271.1.1.1)

Ligands

in contact, ≤ 4 Å

Malonic acidMLA
drugDrugBank DB02175

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Green fluorescent protein

ClanCL0069GFP

External Links

ECOD PDB View: 6XWY RCSB PDB: 6XWY PDBe: 6XWY UniProt: Q8ISF8

Downloads

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