ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5odcL2 - ECOD Domain | ECOD

ECOD/Domains/e5odcL2

e5odcL2

UID: 002577008

PDB

Range: L:2-39,L:408-448
PDB: 5ODC chain L(all domains)
UniProt: A0A2D0TCA6 (all domains)

Molecule: Methyl-viologen reducing hydrogenase subunit A

3D Structure

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Related Domains

Browse other domains in HoxH →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyHoxH(244.4.1.4)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
formyl[bis(hydrocyanato-1kappaC)]ironnickel(Fe-Ni)NFU

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

HoxL-like

External Links

ECOD PDB View: 5ODC RCSB PDB: 5ODC PDBe: 5ODC UniProt: A0A2D0TCA6

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.