ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5odhF2 - ECOD Domain | ECOD

ECOD/Domains/e5odhF2

e5odhF2

UID: 002577011

PDB

Range: F:40-82,F:360-407
PDB: 5ODH chain F(all domains)
UniProt: A0A2D0TCA6 (all domains)

Molecule: Methyl-viologen reducing hydrogenase, subunit A

3D Structure

Loading viewer...

Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyNiFeSe_Hases(244.4.1.2)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal
formyl[bis(hydrocyanato-1kappaC)]ironnickel(Fe-Ni)NFU
Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

ECOD PDB View: 5ODH RCSB PDB: 5ODH PDBe: 5ODH UniProt: A0A2D0TCA6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure