ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6kodC1 - ECOD Domain | ECOD

ECOD/Domains/e6kodC1

e6kodC1

UID: 002577522

PDB

Range: C:1-134,C:251-324
PDB: 6KOD chain C(all domains)
UniProt: A0A140ND83 (all domains)

Molecule: Pyridine nucleotide-disulphide oxidoreductase dimerisation region

3D Structure

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Related Domains

Browse other domains in Pyr_redox_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2(2003.1.2.24)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
COPPER (II) IONCU
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6KOD RCSB PDB: 6KOD PDBe: 6KOD UniProt: A0A140ND83

Downloads

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