ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6s83C1 - ECOD Domain | ECOD

ECOD/Domains/e6s83C1

e6s83C1

UID: 002578277

PDB

Range: C:2-401
PDB: 6S83 chain C(all domains)
UniProt: Q8TZW1 (all domains)
Gene: mat

Molecule: S-adenosylmethionine synthase

3D Structure

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Related Domains

Browse other domains in AdoMet_Synthase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupS-adenosylmethionine synthetase(327.17)

TT-groupS-adenosylmethionine synthetase(327.17.1)

FFamilyAdoMet_Synthase(327.17.1.2)

Ligands

in contact, ≤ 4 Å

Adenosine-5'-[Beta, Gamma-Methylene]TriphosphateACP
drugDrugBank DB03909
Medronic acidMDN
drugDrugBank DB14078

Pfam Families

PF01941AdoMet_Synthase

S-adenosylmethionine synthetase (AdoMet synthetase)

External Links

ECOD PDB View: 6S83 RCSB PDB: 6S83 PDBe: 6S83 UniProt: Q8TZW1

Downloads

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Magnesium ionMG

metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.