ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6khiH2 - ECOD Domain | ECOD

ECOD/Domains/e6khiH2

e6khiH2

UID: 002578403

PDB

Range: H:50-92,H:287-358
PDB: 6KHI chain H(all domains)
UniProt: Q8DJD9 (all domains)
Gene: ndhH

Molecule: NAD(P)H-quinone oxidoreductase subunit H

3D Structure

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Related Domains

Browse other domains in Complex1_49kDa →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyComplex1_49kDa(244.4.1.1)

Ligands

in contact, ≤ 4 Å

Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00346Complex1_49kDa

Respiratory-chain NADH dehydrogenase, 49 Kd subunit

External Links

ECOD PDB View: 6KHI RCSB PDB: 6KHI PDBe: 6KHI UniProt: Q8DJD9

Downloads

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