ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6khjI1 - ECOD Domain | ECOD

ECOD/Domains/e6khjI1

e6khjI1

UID: 002578419

PDB

Range: I:3-191
PDB: 6KHJ chain I(all domains)
UniProt: Q8DL31 (all domains)
Gene: ndhI

Molecule: NAD(P)H-quinone oxidoreductase subunit I

3D Structure

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Related Domains

Browse other domains in Fer4+Fer4_7 →

Classification

AArchitecturea+b two layers(a.11)

XX-group4Fe-4S ferredoxin(205)

HH-group4Fe-4S ferredoxin(205.1)

TT-group4Fe-4S ferredoxin(205.1.1)

FFamilyFer4+Fer4_7(205.1.1.35)

Ligands

in contact, ≤ 4 Å

1,2-Dipalmitoyl-Phosphatidyl-GlyceroleLHG
drugDrugBank DB02043
Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

4Fe-4S binding domain

ClanCL03444Fe-4S

4Fe-4S dicluster domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 6KHJ RCSB PDB: 6KHJ PDBe: 6KHJ UniProt: Q8DL31

Downloads

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