ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6pnjV1 - ECOD Domain | ECOD

ECOD/Domains/e6pnjV1

e6pnjV1

UID: 002578645

PDB

Range: V:1-31
PDB: 6PNJ chain V(all domains)
UniProt: G6FWT6 (all domains)
Gene: psaM

Molecule: Photosystem I reaction center subunit XII

3D Structure

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Related Domains

Browse other domains in PsaM →

Classification

AArchitectureextended segments(a.20)

XX-groupSubunit XII of photosystem I reaction centre, PsaM(5022)

HH-groupSubunit XII of photosystem I reaction centre, PsaM(5022.1)

TT-groupSubunit XII of photosystem I reaction centre, PsaM(5022.1.1)

FFamilyPsaM(5022.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll aCLA
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

Pfam Families

Photosystem I protein M (PsaM)

External Links

ECOD PDB View: 6PNJ RCSB PDB: 6PNJ PDBe: 6PNJ UniProt: G6FWT6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.