ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6puwB2 - ECOD Domain | ECOD

ECOD/Domains/e6puwB2

e6puwB2

UID: 002578667

PDB

Range: B:49-213
PDB: 6PUW chain B(all domains)
UniProt: P39476 (all domains)
Gene: sso7d

Molecule: Chimeric Sso7d and HIV-1 integrase

3D Structure

Loading viewer...

Related Domains

Browse other domains in rve →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyrve(2484.1.1.9)

Pfam Families

Integrase core domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 6PUW RCSB PDB: 6PUW PDBe: 6PUW UniProt: P39476

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure